Showing posts with label SARS-CoV-2. Show all posts
Showing posts with label SARS-CoV-2. Show all posts

Friday, 5 February 2021

COVID-19 : Should You Be Vaccinated?

 



COVID-19 vaccination at Joint Base Pearl Harbor - Hickam 29th Dec 2020.
USN Photo.


Less than a year ago, during the early days of the pandemic, we witnessed COVID-19 outbreaks onboard naval vessels such as the aircraft carrier USS Theodore Roosevelt and the Taiwanese supply ship ROCN Panshih. Thankfully, military leaders around the world have learnt from these incidences and have since implemented the necessary measures such as pre-deployment quarantine, mask-wearing and safe-distancing to drastically reduce the likelihood of such large scale outbreaks among service personnel. Though effective, these disease preventing measures are highly disruptive and restrictive and have a negative impact on moral, work efficiency and productivity.

Now, slightly more than a year since the first cases were reported in the Chinese city of Wuhan, a new tool is made available to fight the novel coronavirus SARS-CoV-2. I am referring to the COVID-19 vaccines that are now starting to be administered to the masses in many countries. It will be through the widespread inoculation of vaccines that will give the world a fighting chance of ending the pandemic so that life can eventually return to normal, well at least a post-pandemic normal.

In many democratic societies, COVID-19 vaccinations are given on a voluntary basis and the current challenge is that many people are unsure if they should receive the vaccines. There are even some who would refuse to believe in the science of disease prevention and would reject the vaccines outright. Herd immunity and therefore the protection of the larger population cannot be achieved if not enough people take up the vaccine.

During this initial vaccine roll-out phase where availability is low, governments are trying their best to prioritize vaccinations for frontline medical personnel and essential services personnel, apart from those who are most vulnerable, like the frail and elderly nursing home residents. For military personnel, if your commander " volunteered " you for the vaccine, or if vaccination is listed as an operational requirement, it might be difficult or even impossible to refuse.

So, are the COVID-19 vaccines safe? The short answer is YES. And I will attempt to explain the science of vaccination in simple terms from the perspective of one who has already received the first dose of the COVID-19 vaccine. 

Disclaimer :  I do not work for any governmental organizations or NGO. I do not own shares or have any direct interest in any pharmaceutical companies, including those that research or produce vaccines. 


How Vaccines Work


Vaccines protect us from infectious diseases by training our immune system to recognize and eliminate those external threats to our bodies with much greater efficiency than it would if left to its own devices. When our immune system first encounters a pathogen such as a bacteria or a virus, it takes time to establish it as foreign to the body. It also takes time to organize an appropriate response to neutralize the threat, usually through some kind of antibody or cellular action.

The process of vaccination presents the immune system with the necessary information to prime it to react almost instantly should it encounter the real threat at a subsequent time. It is like a full-dress rehearsal, or a military exercise to prepare the soldiers for no-duff encounters. Once the immune system had familiarized itself with the infectious agent, it forms memory cells, B-lymphocytes that basically archives whatever the immune system has learnt. Any future encounter with the actual pathogen will result in an immediate activation of immune responses including rapid ramping up of antibody production and cellular defenses, usually with lethal consequences to the invading microbe. And hopefully this instant immune response will spare the host ( that's us ) from contracting the disease or at least avoid severe symptoms.


Preventive Medicine


Ever since the English physician and scientist Edward Jenner created the first modern vaccine against smallpox in 1796, our knowledge in immunology and expertise in vaccine development has increased exponentially. There exist today many safe and effective vaccines against a variety of infectious diseases including influenza, measles, yellow fever, hepatitis B, dengue and human papilloma virus, just to name a few. 

Collectively, vaccines have helped save literally hundreds of millions of human lives in the past centuries. Smallpox killed an estimated 300 million people in the 20th century alone before it was finally declared eradicated in 1980.

In addition to the of loss of lives, many of these infectious diseases cause severe morbidity and long term sequelae which can include blindness ( smallpox ), flaccid paralysis ( poliomyelitis ), permanent mental retardation and recurrent seizures ( Japanese encephalitis ) that can threaten the livelihood of any survivors and their care givers.

Where as most treatment methods in modern western medicine are curative and does nothing to help people avoid getting sick, the process of vaccination is one of a handful that is truely preventive in nature and is considered the most cost effective way to ward off infectious diseases. 


Historical Vaccine Development


Developing a new vaccine against any infectious agent is no mean feat. It takes years, sometimes even a decade or two, to research, design, produce, trial, obtain regulatory approval and finally market a vaccine. Even then the job is never finished as post-market surveillance for adverse reactions continues for many, many more years. It requires the combined effort of a multi-disciplinary team of researchers from immunologists, pharmacists, micro-biologists, geneticists, bio-engineers, epidemiologists, statisticians to clinicians. Success is never guaranteed. 

The costs involved can be staggering too. The International Monetary fund ( IMF ) estimated R&D costs of between USD200 to USD500 millon for each vaccine and an investment of another USD500 to USD1500 million for facilities to produce the vaccine in scale.  

So how could COVID-19 vaccines be possibly developed, approved and mass produced within less than a year? Can they still be safe?


                                                             How vaccines are developed with Dr Anthony Fauci et al            

                                


Developing A Safe Pandemic Vaccine 

 

The COVID-19 pandemic represented an unprecedented global threat to humankind through its medical, socio-economic and environmental impacts. As of today, 104 million have contracted the disease of which 2.27 million had died. Entire cities, even whole countries are in protracted and sometimes recurrent lock-downs in mostly futile attempts to control the epidemic. Jobs and livelihoods are lost as trade and movement of people and goods are severely disrupted. Desperate times calls for desperate measures and fortunately advances in science and technology have made it possible for the accelerated but safe development of the pandemic vaccines. These are some of the enabling factors :

Genomics - advances in the field of genomics have allowed scientists to map out entire genomes of organisms through rapid DNA-sequencing. The structure and function of the genome can then be analysed and determined. Back in 2003 when the human genome was first sequenced, it had cost a billion dollars and had taken 13 long years to complete. Today, the vast increase in computing power, among other things, has allowed the human genome to be sequenced in just 2 days, for about $1000. The COVID-19 epidemic started in Wuhan in early December 2019. By 10th Jan 2020 the entire genome of the SARS-CoV-2 was sequenced, uploaded and freely available to the global scientific community of researchers.

Co-operation - Countries, governments, institutions, corporations and the academia are joining hands in ways never imagined before to combat the global scourge of COVID-19. Through efforts such as GISAID ( Global Initiative on Sharing All Influenza Data ) scientific information on the influenza and the corona viruses are shared on a global scale. Universities are partnering big pharma to research on vaccines like the Oxford-Astra Zeneca duo and the Duke-NUS-Arcturus pairing. Vaccine candidates may also have their clinical trails done concurrently in several countries where the disease burden are the highest and that necessitates the highest level of co-ordination among governments and researchers.

Funding - In the past, vaccine research is mainly funded by individual pharmaceutical companies. Now, governments are pouring hundreds of millions of dollars to drastically accelerate vaccine research and development, usually in exchange for the priority to procure the vaccines when eventually available at an agreed special low price. While money may not be the solution to every problem encountered, the timely accessibility of funds can certainly pave the way for smooth processes.

Accelerated Clinical Trials - Regulatory authorities such as the FDA ( Food and Drug Administration ) have drastically shortened the time required to complete each phase of the clinical trial, without compromising on safety, partly by monitoring the vaccine trials on the fly. Where as in the past data for each phase was submitted for approval only at the end of the phase, now data is continuously uploaded for the authorities to review in real time, so that approval can be granted immediately for progression to the next phase, provided there are no safety issues involved. Another trick is to combine clinical trial phases. Some trials combine phase I and II while other might combine phase II and III. Also during a pandemic where there are high incidences of infection, the time required to reach a clinical end point ( for example, after X number of people involved in the trial got infected ) can be achieved much faster than during normal times when the disease burden is low, and the phase can be concluded earlier.

New Vaccine Technology - messenger RNA ( mRNA ) vaccines represent a new way of manufacturing vaccines and have never been utilized on other vaccines approved before the pandemic. Compared to the traditional way of vaccine manufacturing, these new vaccines have the advantage of using non-infective elements, have much shorter manufacturing time, have the potential to be engineered to target several diseases at the same time and can be developed in a laboratory using DNA templates and readily available materials. All these means that mRNA vaccine production can be more easily standardized and scaled up without affecting the yield, allowing for cheaper and faster roll-out. The Pfizer-BioNTech and Moderna vaccines are examples of mRNA vaccines and are both among the first to complete large scale clinical trials with flying colours. Here's the link to learn the difference between RNA vaccines and conventional vaccines.

Capacity Building - Pharmaceutical companies are preparing and expanding their manufacturing facilities for large scale vaccine production as the vaccines are concurrently being developed so that production can be ramp up rapidly once approval is given. The logistic and transportation industries are similarly preparing for vaccine distribution with expansion to cold storage facilities and delivery fleets. Production of ancillaries required for vaccine production, delivery and administration such as special low temperature glass vials, dry ice and special low dead-space syringes are also increased in anticipation of a huge surge in demand.

All these measures, coordinated on a global scale, have made it possible to produce safe and effective vaccines within a record breaking period of less than a year. With this in mind, let's take a closer look at the Pfizer-BioNTech vaccine, the world's first successful mRNA vaccine, now being administered in the US, UK, Israel, Singapore and several countries that acted early enough to procure it in sufficient quantities.


In Pfizer We Trust
Photo : Wikipedia


Pfizer-BioNTech COVID-19 Vaccine


The American pharmaceutical giant Pfizer's collaboration with BioNTech AG, a German biotechnology company specializing in precise immunotherapies for the treatment of cancers and infectious diseases, started in Aug 2018 with the original aim of producing mRNA-based influenza vaccines. When the COVID-19 outbreak started in Dec 2019, the focus turned towards the development of a coronavirus vaccine.

Pfizer's development of a novel vaccine against COVID-19 was initiated on 10th Jan 2020, the very day the genetic sequences of the SARS-CoV-2 virus was released by the Chinese Center For Disease Control and Prevention via GISAID. It would ultilize BioNTech's already mature mRNA technology. Several variants were created, four of which entered early clinical trials ( combined Phase I/II ) which began in April and May. It would eventually emerge that the most promising vaccine candidate with the best safety profile was the one with the code name BNT162b2. Phase III trials for BNT162b2 started in July involving 43538 participants from the US, Germany, Brazil and Argentina with diverse racial and ethnic backgrounds. By early November, preliminary data suggested the vaccine to be over 90% effective with no serious side-effects. The final results indicated an efficacy of 95% in preventing serious COVID-19 disease, paving way for the declaration of Emergency Use Authorization ( EUA ) by the UK on 2nd Dec and by the FDA on 11th Dec 2020.


mRNA vaccine at the cellular level.
Illustration : New England Journal of Medicine


BNT162b2 is a lipid nanoparticle-formulated, nucleoside-modified mRNA encoding the full-length spike of the SARS-Cov-2 virus. Modifying a key nucleoside of the mRNA strand was crucial in reducing the unpleasant side effects of the vaccine while the lipid encapsulation protects the extremely fragile mRNA and facilitates its entry into the cells of the vaccine recipient. The mRNA would then instruct the cell to produce many copies of the spike-protein which would then trigger an immune response, leading to the eventual production of protective antibodies against the virus. The spike-protein is just an antigenic part of the coronavirus and is safe and non-infectious. The mRNA do not enter the nucleus of the cell where all the genes are located and therefore could never ever come into contact with or modify your DNA. They would be completely degraded and destroyed by all sorts of enzymes in the cells within probably less than 48 hours of vaccination.

The BNT162b2 COVID-19 vaccine is marketed under the brand name Comirnaty, with an international non-proprietary name ( INN ) of Tozinameran. It is supplied in vials of 5 doses and must be stored in ultra-cold temperatures between -60C to -80C, making its distribution and storage a logistical nightmare. It is transported with dry ice in special cold boxes with thermal sensors and GPS trackers to ensure compliance with the manufacturer's recommendations. It must be thawed before use. Its shelf-life is only 5 days when stored at the normal fridge temperatures between 2C to 8C and must be used within 6 hours of reconstitution with saline.


Receiving the first shipment of COVID-19 vaccine at
Naval Hospital Camp Pendleton 15th Dec 2020.
Note ski gloves and thermal sensor. Photo : USN


The vaccination schedule requires 2 injections of 0.3ml 3 weeks apart. Effective protection against COVID-19 disease is observed just 10 days after the first shot, with the second shot acting as a booster dose to further enhance the level of protection. Possible side effects, mostly mild and transient, include the usual array of pain or swelling at the injection site, fatigue, headache, nausea, giddiness, post-vaccination fever, allergic reactions with rashes and rarely anaphylaxis, a potentially life threatening form of drug allergy, with an incidence of 11.1 per million. 

Anyone can receive the Pfizer-BioNTech vaccine apart from those with a past history of anaphylaxis, those who are severely immuno-deficient, pregnant women and young people below the age of sixteen years old. The latter two groups because they were not included in the vaccine's clinical trials so no data on the safety of the vaccine exist at the moment for them. Clinicians do not yet know the protective duration of the vaccine as it is so new but it is hoped that the protection can at least last for 2 to 3 years, if not longer. Otherwise, the vaccination will have to repeated at regular intervals. Another unknown at this stage are the long term side-effects of the vaccine, if any. But from the basic science of immunology governing the design and production of vaccines and our collective experience dealing with many other vaccines, I believe the risks of long term side effects are not high. Vaccine side effects are usually observed within days or at most, within weeks after inoculation, not after months or years!

Pfizer manufactures the BNT162b2 vaccine in Michigan and Belgium. It has plans to deliver 50 million doses of the vaccine by end of 2020 and 1.3 billion doses in 2021. How much does it cost? BioNTech's chief strategy officer Ryan Richardson had said that the vaccine would be priced " well below typical market rates ". The vaccine would also have differential pricing depending on where and to which region it is being sold. It is common knowledge that the US government paid Pfizer $1.95 billion for an initial 100 million doses of the vaccine. So that works out to $19.50 per shot or $39 to vaccinate each person.


Hospital corpsman prepares Moderna vaccine at
US Naval Hospital Okinawa, 29th Dec 2020.
Photo : USN


Adverse Reactions? What Adverse Reactions? 


I was given my first shot of the Pfizer-BioNTech vaccine on 19th Jan 2021. Before the vaccine was given, a series of questions were asked to ensure the vaccine recipient was not feeling unwell, was not on anti-coagulants, did not have a past history of severe drug allergy, did not receive any other vaccines within the past 14 days, were not to be pregnant or breast feeding and other nitty gritty stuff. 

The vaccination process was mostly painless as a fine gauge needle ( 25G ) was used and the injection volume was small ( 0.3ml ). It was an intramuscular injection into the deltoid muscle ( upper arm ) and was completed within a couple of minutes. I had then to wait for 30 minutes at a holding area to be monitored for any possible adverse reactions before being allowed to leave for home. I was issued with a certificate of vaccination with the date for the second shot exactly 3 weeks later.

The only minor side effect that I encountered was a slight soreness at the site of injection which had began 12 hours post-vaccination. Even at its peak intensity at 24 hours, it was at best a mild tenderness which did not affect any of my routine activities. The ache was largely resolved by 36 hours post-vaccination. The injection site was never swollen or red at anytime and I did not develop any fever.

My stamina was not affected by the vaccine as I had attained the same timing for all four of my 10 km runs, the first of which was done 2 hours prior to vaccination and the rest on each of the 3 consecutive days immediately following the vaccination. I even managed to obtain the fastest ever timing for my usual 29 km weekend long run on day 10 post-vaccination. 

In case anyone wonders why I seem to be training a little more than the average person, exactly a year ago, I had failed in my first 100 mile ultra-marathon attempt, just before COVID-19 closed many borders to travelers. Another 100 km ultratrail event which I had enrolled in for the month of May was cancelled. I intend to return to complete these unfinished events sometime in the near future. So COVID-19 or not, I continue to motivate myself to train hard, and hope for borders to reopen soon.

Admittedly, not all vaccinations are smooth going. Perhaps I am just lucky. A friend of mine who is a major in an elite commando unit who had also received the Pfizer vaccine a few days after me had complaint of pain in his arm which lasted for several days. There are a few others whom I have known that had to take a couple of days off from work because they felt feverish or fatigued, but none are really serious events. I have since learnt that the second dose of the vaccine might possibly illicit a slightly stronger reaction from the body and I will update this article accordingly.

* 9th Feb Just completed second and final dose of the Pfizer vaccine. The soreness at the site of injection seemed to begin slightly earlier at 5 hours after vaccination but its nothing more than a niggling ache.

* 14th Feb The soreness, though slight, persisted for a total of more than 4 days. There was a slight swelling at the injection site which lasted for about 3 days. Completed a 78km overnight long run on day 4 post-vaccination with no problems except for some blisters.

So it seems true that once primed by the first dose, the body's reaction to the subsequent dose is slightly more intense, but still well manageable.


#SINKCOVID : One of the vaccine awareness campaign poster, US Navy.



Commemorative sticker, Washington DC Veteran Affairs Medical Center.
15th Dec 2020 Photo : USN


Why Should Anyone Be Vaccinated


The most obvious answer to this question is that COVID-19 infection is a potentially serious disease that can kill, regardless of age. The younger population with a more robust immune system generally fair better but are certainly not completely spared the debilitating symptoms, long term sequelae and even the possibility of death with COVID-19 infections. The SARS-Cov-2 case fatality rate can range from a relative low of 0.2% in the 20 to 29 years old group, to more than 20% for those above 80 years old.

Even if a person survives the acute infection, there are still the protracted post-infection sequelae or what is commonly known as " long COVID " to worry about. Chronic fatigue syndrome, asthenia, coronary syndromes, pulmonary embolism and stroke have all been reported with increased incidences among convalescent COVID patients.

One of the major reasons for vaccine hesitancy is the concern over the safety of these new and untried vaccines which are pushed out in record time. This worry is then exacerbated by inaccurate and frequently false information circulating on the internet and social media. In some communities, COVID vaccines are said to cause infertility. In others, they are the conspiracy theories that governments are trying to implant microchips into our bodies through the process of vaccination to ultimately control us. Some reports would highlight deaths occurring within days of vaccination, but none would eventually be proven to be caused by the vaccines directly. The Russians even claimed that mRNA vaccines will alter our genes and turn us into chimpanzees, absolutely impossible and laughable to a trained scientist, but would seem very real and plausible to the lay person not so well versed in science. Then there are people who had never taken the vaccine but would talk about the side effects and adverse reactions as if they were the experts, except they weren't! 

Another important but often overlooked and understated reason to get vaccinated against COVID-19 is the fact that there is still NO CURE for the disease. All those antiviral agents like Remdesivir, Lopinavir, anti-parasitic agents like Ivermectin and anti-inflammatory agents like Dexamethasone and Hydroxy-Chloroquine do not eradicate or even completely inhibit the coronavirus. They are merely useful at different stages of the infection to slightly reduce the morbidity and mortality rates among a carefully selected cohort of COVID-19 patients. All the hospital and intensive care treatments, ventilators, extra-corporeal membrane oxygenation ( ECMO ) machines, are by nature supportive only to help the severely ill patients through a very serious and stressful period and provide them with whatever their bodies would require to recover from the infection. Sadly, there are many who do not make it despite having the best care money can possibly buy. 

And then we will have to ask ourselves how we can protect those in our communities who in one way or other missed out on the vaccine. The most obvious groups would be the children and teenagers under the age of 16 years old, those who are pregnant and those with a past history of severe life threatening drug allergies. They are excluded in this initial round of vaccination. But what about those who had received the vaccine but subsequently failed to develop a lasting immunity against the coronavirus? The fact that the Pfizer vaccine is 95% effective and that the Moderna vaccine is 94.1% effective against the development of symptomatic COVID-19 disease means that of every 100 persons vaccinated, roughly 5 would fail to acquire the intended protection. The figure is worst for the above 65 years old population as the Pfizer vaccine was found to be only 85% effective among the elderly. How then to protect the 15 out of every 100 elderly people whom though vaccinated still effectively missed out on the protection? If only every single vaccine eligible persons within the community could step out and receive the vaccine, they would create the herd immunity that would ring-fence and protect the vulnerable, those who had missed out on the vaccination through one reason or other. That way the entire community is protected and further transmission of the virus would cease and the pandemic might be put under control. Building up of the herd immunity through the act of vaccination is possibly the most cost-effective, scientific, morally and politically correct way to fight the coronavirus. The alternative would be to have the community acquire herd immunity through natural infection. Up to 70% or more of the population would have to be infected before herd immunity could be achieved by which time millions could have succumbed to the disease.



                                  Vaccine Roll Out with US Defense Health Agency Director LTG Ronald J Place



An electronics technician ( nuclear ) assigned to attack submarine
USS Jefferson City ( SSN-759 ) receives the COVID -19 vaccine
at Joint Base Pearl Harbor - Hickam 23rd Dec 2020. USN Photo.


As mentioned earlier, for the civil population in most democratic countries, COVID-19 vaccination is voluntary. This is good as with such high levels of vaccine skepticism and hesitancy, people are given a choice and are not coerced or forced to receiving the vaccine if they do not wish to for whatever reason. However, those serving in the military or other federal or municipal essential services sector like the police or the coast guard or the fire service may not have such luxury of choice when it comes to COVID-19 vaccination. As they frequently have to be in close contact with other people during the course of their work, they are at high risk of being infected. The critical nature of their jobs also means that they cannot afford to be falling sick and be taken off for sick leave for any protracted duration. Many will have to be deployed on overseas missions on land or at sea in regions that may have high rates of coronavirus transmission. Yet others might have the burden of national security on their shoulders, like for example the Gold and Blue crew of the Ohio-Class ballistic missile submarine, who absolutely cannot afford to have a coronavirus outbreak onboard their boat during a several month long nuclear deterrent mission. That is exactly why the members of the Strategic Services get top priority for vaccination in the US military. 

Several people in active military service that I have spoken to have either already received the first dose of the vaccine or were told that they would be having it soon, without any options to decline, much as I had expected. For many, it would come as an explicit order from the unit commander : get vaccinated, period.




Global COVID-19 Vaccination Drive


The UK became the first country to approve a stringently evaluated coronavirus vaccine on 2nd Dec and the first in the western world to start mass vaccination on 8th Dec 2020. At the time of writing, the biggest vaccination campaign in the history of humankind is taking place in 66 countries and so far a total of 107 million shots had been administered*. At present the rate of vaccination globally is approximately 4.22 million shots per day. Israel leads the pack with at least 20% of its population vaccinated while the UK and US have each achieved 10% and 7% respectively. With more than a hundred million doses administered cumulatively worldwide and no major adverse events reported, surely logic would tell us that the myriad of COVID-19 vaccines in general are safe. 

In the coming days and weeks, more countries will begin their vaccination campaigns, just as more COVID-19 vaccines are being approved for emergency use by the regulatory health authorities. Never in history had so many vaccines been administered in so short a time.

* Around 2nd Feb 2021, the number of vaccinated persons ( 107 million ) as surpassed the number of infected persons ( 104 million ) globally for the very first time since the start of the pandemic. A watershed moment.


The Legacy Of The COVID-19 Pandemic


The impact of the pandemic on every aspect of our life has mainly been negative but one of the rare positive outcome from this global epidemic would definitely be its role in accelerating the advancement in vaccine research and development. If not for COVID-19, who knows how long it would take for the first successful mRNA vaccine to be developed and when we would get our first ever approved vaccine against a human coronavirus disease. Before COVID-19, nobody with the right mind would predict that dozens of vaccines against the same disease could be concurrently developed and successfully achieve regulatory approval in a year or less. Already, a number of winners have appeared among the 150 or more COVID-19 vaccine candidates that started out a year ago. Now the World Economic Forum has an even more ambitious goal of producing a vaccine within 100 days of a pandemic

While the dust had more or less settled in the race to develop the first effective COVID-19 vaccine, another race had just began. And that is the race between countries to vaccinate as many of their own population as possible. The current challenge is for the manufacturers to churn out vaccines quickly to alleviate the acute shortage that every country faces. It will certainly go a long way to stem vaccine nationalism behaviors that some countries are increasingly exhibiting, like imposing vaccine export controls and vaccine hoarding. But these are mostly things above our pay scale. For the majority of us, we just have to do our part by accepting the vaccine when it comes our way .... 



COVID-19 ward, early 2020, China. Photo : China Daily



Johns Hopkins Global COVID-19 Map


 

Take Home Messages


COVID-19 disease is real and serious. It is not a hoax and it will not go away on its own. 

There is still no cure for COVID-19. Existing treatments are merely supportive in nature.

The COVID-19 vaccines approved by stringent regulatory authorities such as the US FDA and the UK MHRA for emergency use are generally safe and efficacious.

The risk of adverse reactions from COVID-19 vaccines are very low and are mostly transient and manageable.

There has been no COVID-19 vaccine related deaths so far. **

Achieving herd immunity through mass vaccination is our best bet to control the pandemic.

Unless vaccination is contraindicated, every eligible person should be vaccinated, if possible.

Get vaccinated as soon as available. Do not wait for others.

Get vaccinated even if there are low levels of COVID-19 transmission within your community. The situation is always fluid and can potentially deteriorate rapidly.

Many of the COVID-19 vaccines continue to demonstrate high levels of efficacy against the new mutant COVID-19 strains and can be readily adapted to deal with future mutations.

Vaccines alone will not put an end to the pandemic. Safe distancing, mask wearing and good personal hygiene must continue to be strictly observed even after vaccination has been completed.

Nobody is safe unless everybody is safe. No country is safe until every country is safe.

Do not believe in everything that you see or hear on the internet or social media. Fact check where necessary and make good use of your critical thinking skills. Believe in science, not rumours. Above all, NEVER drink bleach!



** Update 21 Apr 2021. Unfortunately this is no longer true. The Oxford AstraZeneca and Johnson & Johnson vaccines have been implicated in causing a rare but severe form of blood clotting event characterised by LOW platelet counts. Several have died. Known as vaccine-induced immune thrombotic thrombocytopenia ( VIIT ), it has an incidence of 1 in 250000 vaccinations. This is still way lower than the risk of dying from severe COVID-19 disease, which stands at 2 in 1000 even for a young adult. 

This adverse reaction is peculiar to the two vector-based vaccines and are not observed in other vaccine brands such as the Pfizer or Moderna vaccines. The AZ and J&J vaccines are still generally safe to use especially for high risk individuals in communities with high transmission rates and where alternative vaccine brands are not available. 




   

Wednesday, 8 April 2020

COVID-19 : Radical Changes For Naval Operations And Future Ship Designs Needed




Coronavirus by TP Heinz via Pixabay




As I write, the coronavirus pandemic which began as a mysterious respiratory illness in Wuhan City of China late last year has now engulfed the whole world with more than 1.4 million infected and more than 82000 deaths. The disease is officially known as COVID-19 ( coronavirus disease 2019 ) and the virus responsible for the illness is the SARS-CoV-2 ( Severe Acute Respiratory Syndrome Coronavirus 2 ).

Symptoms of the infection can range from asymptomatic to being a flu-like illness with malaise, fever, cough and dry throat, to severe respiratory distress requiring critical care. Being a viral illness meant that there is no effective treatment against it and it is largely left to the immune system to deal with the infection. Any medical intervention is therefore limited to providing life support and preventing further spread of the contagion.

Since the virus spread by means of droplets and surface contact, conditions of crowding and close person-to-person contact would facilitate its transmission. It was therefore not surprising that in Jan 2020 the Diamond Princess, a cruise ship which carried a total of 3711 passengers and crew, became a hotbed for COVID-19 transmission. It was quarantined at the Japanese port city of Yokohama since early February but because of poor, inadequate and perhaps ineffective infection control onboard, the total number of confirmed cases of COVID-19 eventually reached 712 with 567 passengers and 145 crew members infected. 12 had died.



The crowded pilot house of the Gerald R Ford ( CVN-78 ) during replenishment-at-sea.
 It is impossible to achieve any meaningful physical distancing when
working and living onboard a ship. USN Photo



Now the living conditions onboard a warship is not much different from those onboard a commercial vessel. Space is always a premium on a ship. Confining a large group of people to a small area for an extended duration is the prime recipe for a highly contagious disease to spread. During a pandemic, all ships, merchantman or man-of-war, are simply floating incubators, epidemiological time bombs waiting to explode. With the news that the nuclear-powered attack carrier USS Theodore Roosevelt ( CVN-71 ) has been ravaged by the coronavirus and is now anything but war capable, we know that even the world's mightiest navy is not immune to this health menace. Is there anything that can be done to minimize the risk of a COVID-19 outbreak onboard a warship? Of course there are, but it would mean many of our traditional habits and the way we conduct our businesses and carry out our missions would have to be modified or changed drastically. Perhaps every future ship design would have to include special areas for medical treatment and isolation and even berthing arrangements and living quarters have to be redesigned.

As a case study we can look to the USS Theodore Roosevelt to appreciate what a tiny virus can do to a large warship in a matter of days.





The USS Theodore Roosevelt at the South China Sea with the
America Expeditionary Strike Group 15th Mar 2020. USN Photo.


The Grounding Of A Carrier



The Roosevelt Carrier Strike Group ( CSG ) comprising of the aircraft carrier USS Theodore Roosevelt and its surface and submarine escorts including the guided missile cruiser USS Bunker Hill ( CG-52 ) and several destroyers departed San Diego on 17th Jan 2020 for its Indo-Pacific deployment.

The CSG arrived at Apra Harbor, Guam, on 6th Feb after sailing across the Pacific Ocean. We can assume the sailors were granted their well deserved shore leave on Guam and they had also participated in various community relations activities over that weekend, such as interacting with young kids from a school, clearing and cleaning up a trail in a nature park, repainting of a veteran's memorial, and some other miscellaneous repairing and rebuilding projects.

It then sailed westwards and arrived at Da Nang on 5th Mar to commemorate the 25th anniversary of the normalization of US-Vietnam diplomatic relations, becoming the second US aircraft carrier to make a port call in Vietnam since the fall of Saigon in 1975. As it was a high profile visit, the CSG was met by a whole host of Vietnamese and US government and military officials including Adm. John C. Aquilino, commander of the U.S. Pacific Fleet, and U.S. Ambassador to Vietnam Daniel Kritenbrink. Needless to say, there were also plenty of functions and receptions for the senior ranks to attend both ashore on onboard ship. For the lower ranks, the usual community relations projects were unavoidable. Somehow the military just love these social out reach programs and they can never have enough of them.



Reception at Da Nang 5th Mar 2020 : Ambassador Daniel Kritenbrink
with COMPACFLT Adm John Aquilino (R),
COMCARSTRKGRU9 RAdm Stuart Baker (L)
and Capt Brett Crozier ( extreme L ). USN Photo.


Roosevelt ship crew dancing with locals at Dorothea's Project Legacies
Charity Center Da Nang 6th Mar 2020. USN Photo.



Military dignitaries from the Socialist Republic of Vietnam
 visited the carrier on 7th Mar 2020. USN Photo.


After Da Nang, on 15th Mar the CSG deployed to the South China Sea and sailed with the America Expeditionary Strike Group and the 31st Marine Expeditionary Unit as a combined Expeditionary Strike Force. On 18th Mar the CSG even managed some joint exercise with aircrafts like the F-15C from the US Pacific Air Forces operating out of Kadena AFB in Okinawa with a B-52H thrown in.



Exercising with the Air Force in the Philippine Sea 18th Mar 2020. USN Photo.



By 24th Mar however, the first cases of coronavirus infection has been reported among 3 ship crew onboard the Teddy Roosevelt. The number of the infected increased to 8 just a day later. Most of the infected only showed mild symptoms but they were flown off the aircraft carrier to the US Naval Hospital Guam for further tests, evaluation and quarantine. To fight the worsening outbreak, the US Navy had by then ordered the diversion of the carrier back to Guam and to have all of her 4845 sailors and airmen tested for the coronavirus. Acting Secretary of the Navy Thomas Modly insisted that the carrier was still fully operational despite the disease outbreak but we known otherwise. How can a carrier be combat ready when it is tied at pier-side?


Captain Brett Elliott Crozier, USN. CO USS Theodore Roosevelt.
Photo : Wikipedia


Unfortunately for the Teddy Roosevelt, the number of infected sailors just kept increasing exponentially. By the time the carrier docked at Guam on 27th Mar the figure had risen to 25 infected. Soon after it became 36, and then 70. Worried about the health and safety of the sailors and airmen onboard the carrier, the commanding officer Captain Brett Crozier wrote a memo to the naval high command pleading for help to contain the outbreak, specifically to authorize the removal of about 4000 ship crew to a land based facility for two weeks of quarantine while a skeletal crew remain shipboard to run and maintain critical systems and deep clean the ship. The problem was Guam being an island in the middle of the Pacific Ocean did not have means to quarantine 4000 people on land. The captain's memo was somehow leaked to the San Francisco Chronicle and before anyone knew, the entire world had learnt about the Roosevelt's predicament.


Aerial view of Apra Harbor, Guam with USS America (LHA-6)
at pier side 21 Mar 2020. USN Photo.

 As a result of his plea and the publicity it generated, arrangements have been made to transfer about three thousand sailors ashore for quarantine. Not all could be evacuated as a skeletal crew had to remain onboard to operate critical systems that could not be shut down, like the Roosevelt's two Westinghouse A4W pressurized water nuclear reactors. Security and fire fighting details and a few hundred ship crew will have to remain onboard to deep clean the carrier which was estimated to take about 10 days. One thousand had left the ship on 1st Apr, with more to follow. It generated a lot of unhappiness among the local population of Guam who were rightly afraid that the sailors would introduce the coronavirus to their island.

So far all the infected personnel are medically stable and do not require hospitalization, ventilator support or critical care. Nobody from the Roosevelt has yet died from the infection but the captain's actions would eventually cost him his job. On 2nd Apr Acting Secretary of the Navy Thomas Modly relieved Capt Brett Crozier of his command citing loss of confidence and lack of leadership in times of crisis. He left his ship amidst a rousing send off by the ship crew, who clearly believed that their commanding officer had acted with their safety and well being at heart. By then the number of infected had already reached 114.



Seabees from the 1st and 5th Naval Mobile Construction Battalion
with vehicles to transport sailors to shore based quarantine facilities
3rd Apr 2020. USN Photo.


COMSEVENTHFLT Vice Admiral Bill Merz visits barracks
housing quarantined sailors at Guam 5th Apr 2020. USN Photo.


By 5th Apr Defense Secretary Mark Esper told CNN there were 155 infected. Even the poor captain himself had come down with the infection and is currently in quarantine. He had shown symptoms before he left his command.

The latest twist of this saga was that Thomas Modly himself was forced to resign as the acting secretary of the Navy on 7th April, a day after he described Capt Crozier as " too naïve or too stupid " to be in command, in a speech given during his visit to the aircraft carrier. The abrupt manner of Capt Crozier's dismissal as the commanding officer without going through a board of inquiry and due process was also a sticking point among naval personnel. The latest infected numbers on 7th Apr stood at 230 and it will surely go up in the coming weeks.*

As anyone could see, in about slightly more than a week, there were more than two hundred personnel who contracted the virus and the aircraft carrier is effectively non-operational being confined to port with more than half its compliment disembarked and on quarantine. We might never know how the virus first infected the ship, but a common assumption was from the 5 day port visit to Da Nang ( 5th - 9th Mar ). With the bulk of its crew now in quarantine, I suspect the Roosevelt's COVID-19 cases will peak in two weeks though new cases will continue to emerge sporadically for several more weeks since not all ship crew could be quarantined at the same time.

The good news is that since most of the ship's compliment are young and presumably healthy, most of Roosevelt's COVID-19 cases should recover with hopefully minimal complications. And once these people recover, they should have immunity against the coronavirus and they can even be deployed to provide care for their COVID-19 stricken compatriots without the need for those cumbersome personal protective equipment! They can also be a reliable donor source for the promising but not yet FDA-approved convalescent plasma therapy where the neutralizing antibodies against the coronavirus present in the plasma of recovered patients is transfused to help the acutely infected recover. In the unlikely event that a huge proportion of the ship crew eventually acquires the infection and the herd immunity threshold ( HIT ) is reached, the rest of the uninfected members will then be protected. The problem is this coronavirus outbreak is so new that nobody really knows what its HIT is. For measles, the HIT is between 90 to 95% to achieve herd immunity. Other less contagious diseases have lower HIT.

* 10 Apr - infected ship crew now hits 416. 3170 tested negative with 1164 results still pending. One sailor in ICU.

* 11 Apr - 92% ship crew tested. 550 positive, 3673 negative. 3696 moved ashore.

* 13 Apr - 585 infected. One death.

* 15 Apr - 615 infected. Majority asymptomatic ( 350 ). Chief Petty Officer Charles Thacker identified as sailor who died.

* 23 Apr - 840 positive. 4098 negative. 4234 moved ashore. 88 recovered. Tests completed.

* 28 Apr - USN COVID-19 Update website says 940 active cases, 29 recovered. Change in reporting parameter means only those with 2 successive negative tests count as recovered.


Infection Control Measures For COVID-19


To prevent personnel from acquiring and spreading COVID-19 onboard warships especially during deployments of prolonged duration, navies have to completely change the usual way peacetime naval operations are conducted.

As COVID-19 numbers keep rising in every country which can only mean there is sustained local / community transmission of the coronavirus, it is inevitable that some military personnel would have been infected as well. Whereas the ground and air force personnel could be immediately isolated and sent home or quarantined at a designated facility when found to be infected, the same arrangements could be impossible for naval personnel during a major deployment. Here are some changes that can potentially make a difference in the prevention of contagion onboard deployed ships.


Defer Unnecessary Trainings And Deployments


Just as the general public had been told to avoid and defer all unnecessary travels, the navy should also limit their fleet deployments to those that are of absolute necessity. All training deployments should be deferred until the pandemic has run its course. All chest-thumping / show-of-force type operations like those Freedom of Navigation operations should cease immediately. Training exercises can be postponed. If it is about saving lives like search and rescue missions, medical relief missions for the pandemic, or if the sovereignty or survival of the nation is at stake, like nuclear deterrence missions, proceed with caution.


Pre-Deployment Quarantine


The incubation period ( time between exposure to the development of symptoms ) of the SARS-CoV-2 virus is said to be between 2 to 7 days with a mean ( average ) of 4 days. In some cases the incubation period can be as long as 14 days. In order to ensure all embarked ship crew are healthy and not carrying or incubating the virus, they should be put to 14 days of pre-deployment quarantine. It should preferably be done at a base facility where there are rooms with attached toilet and shower, one individual to each room. There should be daily temperature checks and the monitoring of symptoms.

Any individual who develops fever or flu-like symptoms during this 14 day isolation period will have to be thoroughly checked for COVID-19 infection. Only if the individual is well and symptom free at the end of the 14 days can he or she be allowed to embark for deployment.


Vessel Preparation For Deployment


While the ship crew are under pre-deployment quarantine, the usual routine pre-sailing ship preparation will perhaps have to be undertaken by their squadron mates. Fuel, ammunition and food supplies have to be loaded, preferably in quantities sufficient to last the entire deployment if practicable. Such stores should be sanitized prior to loading onboard ship with the appropriate method, disinfectant spray, ultraviolet light etc. Medical supplies including personal protective equipment, medications, diagnostic equipment will have to be catered for. The ship should be deep cleaned prior to the embarkation of those who passed quarantine.


Special Measures When Underway


Ship crew should refrain from group gatherings like briefings and meetings as much as possible. They should try to maintain a physical distance of at least a metre from each other if practicable. Meal times should be staggered to avoid having large groups in the mess hall. The use of recreational facilities like the gym and ward rooms should similarly be regulated to maintain physical distancing.

Since ship systems need to be manned continuously once underway, the crew would have been organized into different teams to work in shifts. Members of different teams should also refrain from mingling with each other after-shift so that in case any team member is down with an infection and the entire team has to be in quarantine, at least the other teams would not be affected.

Another important area to note is movement of personnel between different vessels of the task group should be prohibited. Similarly transfer of personnel in and out of each ship should also be limited to medical or other emergencies only.


Avoiding Unnecessary Port Calls


This will be tough as port calls are frequently the highlight of every deployment. Who does not like the opportunity to visit a foreign city and experience a different culture even if it is only for a few days? Many things happen during port calls as ships replenish their depleted food supplies and take on fuel if necessary. The host country might organize a reception ashore for the ship's company and then the ship will have to reciprocate by hosting a shipboard reception during which lots of guests and ship officers and crew will mingle and party. There is no doubt that such functions are standard naval protocol and can foster the development of bilateral ties, friendship and camaraderie. They are also potential hotbeds for COVID-19 transmission and should be banned altogether during this pandemic.

It is also a common practice for navies all over the world to conduct community relations events or community outreach programs whenever the ship docks at a foreign port. So visiting some orphanage or old folk's home, repainting a school, cleaning up a beach or a park .... becomes mandatory for the lower ranks. These activities can frequently bring real benefits to the local communities, touch lives and also hopefully benefit the participants by accentuating their sense of humility seeing and serving the less fortunate. Again, during an epidemic or pandemic, these relations building activities should cease completely. The opportunity to serve will always remain and can be engaged again after the disease outbreak is under control.

For short deployments ships should therefore be as self-sufficient as possible and avoid port calls altogether. For longer deployments, port visits should be limited to taking on and off-loading essentials and no shore leave should be granted. No visitors should be allowed onboard the ship unless of absolute necessity, like the harbor pilot to ensure safe navigation into and out of the port. Even then keep a safe physical distance and provide the pilot with a surgical mask if he is not already wearing one and remind him not to touch anything. And don't forget to clean up the bridge after he leaves.


Good Personal Hygiene


Perhaps the single most important measure against the spread of the coronavirus is the practice of good personal hygiene. An infected person will be shedding a lot of the virus through the nasal mucous and phlegm from the throat. When he or she sneezes or coughs, droplets can land on surfaces or be directly inhaled by others in close proximity. An infected person's hands will be also likely be heavily contaminated with the virus if he or she wipes the nose without subsequently washing the hands.

With the understanding of how the virus spreads, frequent hand washing with soap or the use of disinfecting hand rubs are therefore the best defense against getting infected. Keep your hands clean and try not to touch your face or rub your eyes because that's how the virus enters your body - through the eyes ( conjunctiva ), the nose or the mouth via your dirty hands.

Wash your hands before you have your meal and also after you have visited the toilet. Coronaviruses can be shed through the feces of an infected person. Sometimes viral RNA can be detected in the feces long after they have recovered from the illness, though it could be just viral genetic material and not the viable virus itself. So shared heads / communal toilets must be kept clean. Common areas should be regularly cleaned with disinfectants.





Masks


There is now sufficient evidence to suggest that pre-symptomatic spread of the coronavirus can occur. Universal mask wearing might be a good idea for all personnel onboard the ship for self protection and for protecting others should one fall sick and unknowingly spread the virus during the incubation phase. Exemptions can be made for those in anti-flash gear.

A properly made disposable surgical mask has a waterproof middle layer that prevents respiratory droplets from a sick person from escaping and infecting other people. An N95 type respirator is not necessary for non-medical use. Not only are some types of N95 mask not fluid resistant, they are also very uncomfortable to wear and may result in the wearer touching the face much more frequently to adjust the uncomfortable mask resulting in higher risk of infection.

Masks alone cannot prevent COVID-19 infection and must be used in combination with other measures for infection control. Between them, hand washing and physical distancing are still more important.

There is currently a worldwide shortage of masks, surgical as well as N95, as the pandemic rages. Most mask manufacturing countries have restricted and then banned their export altogether with the hope of keeping whatever is available for themselves. Since we are nowhere even near the peak of the pandemic, mask shortages will be the order of the day for many many months to come. Conserve your masks and save your stock for later when shit really hits the ceiling. Quartermasters and medics guard your mask supplies like gold and ration them carefully.

Unless you have an unlimited supply, do not discard your mask after a single use like what most would do before. Instead, keep the disposable mask clean and you can reuse it for 2 or maybe 3 days. When removing the mask for later use, remember not to touch the outer, potentially contaminated surface of the mask. Hold it by the straps and keep it in a clean zip lock bag. If surgical masks are not available, studies have shown that even reusable / washable cloth masks can be better than no mask at all.



Impact On Future Ship Designs


As the world population continue to grow and our insatiable demand for resources drive us towards large scale exploitation of nature, human exposure to wild animals will increase exponentially and with it the number of zoonotic diseases. A zoonosis is an infectious disease caused by a pathogen that has jumped from its usual animal host to humans. Some recent examples include Marburg Haemorrhagic Fever ( 1967 W. Germany ), Ebola virus disease ( 1976 Sudan, Congo), Hanta virus pulmonary syndrome ( 1993 Four Corners, US ), H5N1 Avian Influenza ( 1997 Hong Kong ), Nipah virus disease ( 1998 Malaysia ), SARS ( 2002 Hong Kong ), MERS ( 2012 Middle East ) and COVID-19. These emerging infectious diseases frequently cause severe symptoms and carry with them high mortality rates.

To cater for these ever frequent disruptive epidemics, naval architects should design future warships with special considerations for disease prevention and treatment. Living quarters and work spaces could be bigger. Hot bunking should be a thing of the past. Every sailor should have his or her own room, even if it means it has to be capsule hotel style, small and cramped. The current bunking arrangement of segregation by rank, that is, Officer's mess, Petty Officer and Chief Petty Officer's mess, Junior Rank's mess, should be reviewed. It involves too much movement and intermingling of ship personnel. Instead ship crew should be divided into watch keeping teams and personnel from the same team bunk together, regardless of rank. So a ship can have several such sleeping quarters for different watch keeping teams and each should have its own heads, shower, laundry facilities, mini pantry, recreation area and maybe even a mini gym.

The ship should have dedicated rooms for medical treatment and isolation in case of a disease outbreak onboard the ship. Each isolation room should have its own toilet and sink so that the crew member in isolation need not get out of the room to wash or relieve himself. This requirement can be tough to meet on a small platform like Singapore's Victory-class missile corvette which is 62m long and has a displacement of 595 tonnes, but nobody says you should build designs like these anymore.

The future ship should also have advanced communications links between different compartments to transmit real time video and audio signals to reduce the need for the ship crew to physically gather for meetings and briefings.

The ultimate goal could perhaps be to eliminate the human crew altogether. If we can have a frigate-sized unmanned surface vessel that is remotely controlled and unmanned droid-carrying amphibious assault ships, we will not have to worry about diseases and outbreaks. In the event of war, there will be no casualties to worry about either! A Little far fetched but this day may arrive sooner than we think.

And lastly, for our readers whose town or city might be in lock down due to the COVID-19 pandemic, a gentle reminder to STAY HOME and help flatten the epidemiological curve in your country.